@article{Smith2016, archivePrefix = {arXiv}, arxivId = {1412.0709}, author = {Smith, Cameron and Puzio, Raymond S. and Bergman, Aviv}, eprint = {1412.0709}, journal = {(preprint under review: http://arxiv.org/abs/1412.0709 ) Cell}, month = {sep}, pages = {23}, title = {{Hierarchical Network Structure Promotes Dynamical Robustness}}, url = {http://arxiv.org/abs/1412.0709}, year = {2017} } @article{Chastain2016, author = {Chastain, Erick and Smith, Cameron}, doi = {10.1109/TMBMC.2017.2655024}, issn = {2372-2061}, journal = {IEEE Transactions on Molecular, Biological and Multi-Scale Communications}, month = {dec}, number = {2}, pages = {240--248}, title = {{Process Information and Evolution}}, url = {http://ieeexplore.ieee.org/document/7822918/}, volume = {2}, year = {2016} } @article{Smith2015b, archivePrefix = {arXiv}, arxivId = {arXiv:1506.02749}, author = {Smith, Cameron and Pechuan, Ximo and Puzio, Raymond S and Biro, Daniel and Bergman, Aviv}, doi = {10.1098/rsif.2015.0179}, eprint = {arXiv:1506.02749}, issn = {1742-5689}, journal = {Journal of The Royal Society Interface}, number = {108}, pages = {20150179--20150179}, pmid = {26040595}, title = {{Potential unsatisfiability of cyclic constraints on stochastic biological networks biases selection towards hierarchical architectures}}, volume = {12}, year = {2015} } @article{Smith2015a, archivePrefix = {arXiv}, arxivId = {1506.04611}, author = {Smith, Cameron and Laneuville, Matthieu and Guttenberg, Nicholas}, eprint = {1506.04611}, journal = {(under review) Artificial Life}, month = {jun}, pages = {1-8}, title = {{Emergence of self-reinforcing information bottlenecks in multilevel selection}}, url = {http://arxiv.org/abs/1506.04611}, year = {2015} } @article{Chow2013, author = {Chow, Siu-Kei and Smith, Cameron and Maccarthy, Thomas and Pohl, Mary Ann and Bergman, Aviv and Casadevall, Arturo}, doi = {10.1016/j.chom.2013.03.001}, issn = {1934-6069}, journal = {Cell host {\&} microbe}, month = {apr}, number = {4}, pages = {417--28}, pmid = {23601104}, title = {{Disease-enhancing antibodies improve the efficacy of bacterial toxin-neutralizing antibodies.}}, url = {http://www.cell.com/cell-host-microbe/abstract/S1931-3128(13)00111-X}, volume = {13}, year = {2013} } @article{Garcia-Solache2013, author = {Garcia-Solache, Monica A and Izquierdo-Garcia, David and Smith, Cameron and Bergman, Aviv and Casadevall, Arturo}, doi = {10.1128/mBio.00100-13}, issn = {2150-7511}, journal = {mBio}, month = {jan}, number = {3}, pages = {e00100--13}, pmid = {23631914}, title = {{Fungal virulence in a lepidopteran model is an emergent property with deterministic features.}}, volume = {4}, year = {2013} } @article{VanOers2013, author = {van Oers, J M M and Edwards, Y and Chahwan, R and Zhang, W and Smith, C and Pechuan, X and Schaetzlein, S and Jin, B and Wang, Y and Bergman, A and Scharff, M D and Edelmann, W}, doi = {10.1038/onc.2013.365}, issn = {0950-9232}, journal = {Oncogene}, month = {sep}, pages = {3939--3946}, pmid = {24013230}, title = {{The MutS$\beta$ complex is a modulator of p53-driven tumorigenesis through its functions in both DNA double-strand break repair and mismatch repair}}, url = {http://www.nature.com/doifinder/10.1038/onc.2013.365}, volume = {33}, year = {2013} } @article{Smith2012, author = {Smith, Cameron Ray}, doi = {10.1126/science.336.6077.32}, issn = {0036-8075}, journal = {Science}, month = {apr}, number = {6077}, pages = {32--34}, title = {{NextGenVOICES: Definition of Success}}, url = {http://scim.ag/NextGen2Results}, volume = {336}, year = {2012} } @article{Wontakal2012, author = {Wontakal, Sandeep N and Guo, Xingyi and Smith, Cameron and MacCarthy, Thomas and Bresnick, Emery H and Bergman, Aviv and Snyder, Michael P and Weissman, Sherman M and Zheng, Deyou and Skoultchi, Arthur I}, doi = {10.1073/pnas.1121019109}, issn = {1091-6490}, journal = {PNAS}, keywords = {Animals,Basic Helix-Loop-Helix Transcription Factors,Basic Helix-Loop-Helix Transcription Factors: meta,Cell Differentiation,Chromatin Immunoprecipitation,Erythrocytes,Erythroid-Specific DNA-Binding Factors,Erythroid-Specific DNA-Binding Factors: metabolism,GATA1 Transcription Factor,GATA1 Transcription Factor: metabolism,Gene Expression Regulation,Genetic,Kruppel-Like Transcription Factors,Kruppel-Like Transcription Factors: metabolism,Lymphocytes,Lymphocytes: cytology,Mice,Models,Proto-Oncogene Proteins,Proto-Oncogene Proteins: metabolism,Stem Cells,Stem Cells: cytology,Theoretical,Trans-Activators,Trans-Activators: metabolism,Transcription}, month = {mar}, number = {10}, pages = {3832--7}, pmid = {22357756}, title = {{A core erythroid transcriptional network is repressed by a master regulator of myelo-lymphoid differentiation.}}, volume = {109}, year = {2012} } @article{Marguet2010, author = {Marguet, Philippe and Tanouchi, Yu and Spitz, Eric and Smith, Cameron and You, Lingchong}, doi = {10.1371/journal.pone.0011909}, issn = {1932-6203}, journal = {PloS one}, keywords = {Bacterial,Escherichia coli,Escherichia coli: genetics,Gene Expression Regulation,Genes,Periodicity,Synthetic,Synthetic: genetics}, month = {jan}, number = {7}, pages = {e11909}, pmid = {20689598}, title = {{Oscillations by minimal bacterial suicide circuits reveal hidden facets of host-circuit physiology.}}, volume = {5}, year = {2010} } @article{Smith2008, author = {Smith, Cameron and Song, Hao and You, Lingchong}, doi = {10.1016/j.jmb.2008.08.009}, issn = {1089-8638}, journal = {Journal of molecular biology}, keywords = {Acyl-Butyrolactones,Acyl-Butyrolactones: metabolism,Bacterial Physiological Phenomena,Bacterial Proteins,Bacterial Proteins: chemistry,Bacterial Proteins: genetics,Bacterial Proteins: physiology,Biological,Drug Stability,Models,Quorum Sensing,Quorum Sensing: genetics,Quorum Sensing: physiology,Signal Transduction}, month = {oct}, number = {5}, pages = {1290--7}, pmid = {18721812}, title = {{Signal discrimination by differential regulation of protein stability in quorum sensing.}}, volume = {382}, year = {2008} }